![]() This pop-message can be avoided if you press the key before clicking on the button. A pop-up message will ask for confirmation before deleting a Feature (there is no undo). The + and button are used to add and delete a Feature respectively. To alter the order simply drag the Feature at another position in the list. The order in the list dictate the order by which Features will be drawn, and this can be important in case they overlap. To change the Feature color, click on the colored box and select another color. A feature can have or not a pointing arrow ('Arrow' checkbox). To decide to Show or Hide all features at once, press the key before clicking on the checkbox. Shown features are listed in Bold characters. One can select whether a feature will actually be displayed on the map (using the 'Show' checkbox). ![]() The Edit button is used to toggle between the 'protected' mode where no unwanted modification can be done and the 'Edit' mode. To edit (add/delete/modify) Features, one has to be in the 'Edit' mode. A list of Features is shown on the left double clicking on one will select the corresponding nucleotide sequence. Accessing features in the Sequence window A new tab has been added (Features) that gives access to features characteristics and management. The symbol indicate that this function has been added or updated in V2.1 I. Here are some descriptions and hints about these new possibilities. Handling Features/Annotations Since version 2.0, Serial Cloner handles annotations and features. Table 1: File Types Imported by SeqMan NGen for De Novo Assemblies and Templated Alignments (Special Workflows) Note: SeqMan NGen supports the export of data in. Below are the file types supported for import for both normal workflows and special workflows. ![]() SeqMan NGen is included within Lasergene Genomics. Image Files (*.png, *.jpg, *.gif, *.bmp 8)ġ File-Save will save back as original file type. These files are not supported through the menu system.ĩ Projects or files must contain protein sequence data.ġ0 Only the sequence, features and comments of the file will be read in.ġ3 Lasergene does not support ABI files without base calls.ġ4 Protean 3D supports version 3.2 of PDB files.ġ5 Available to support gap closure in SeqMan Ultra and for assembly in SeqMan NGen.ġ6 Supports *.txt and *.gp UniProt files only.įASTA Format (*.fas, *.fap, *.fna, *.fasta) All other files will be ignored.Ģ Multiple Lasergene DNA sequence files can be created by EditSeq, SeqMan Pro, and MegAlign.ģ FOF can not contain reference to another multiple sequence file format such as FastA, DNA* mseq, or Zip.ĥ Referred to collectively as “Lasergene Documents” in “Files of Type” or “Show pull-down menus”.ħ GenBank formatted features will be parsed.Ĩ Through “drag and drop” only. SeqMan NGen Transcriptome Files (*.transcriptome)ġ Only zip files containing ABI, SCF3, Lasergene protein or Lasergene DNA files. SeqMan NGen Assembly Projects (*.assembly) Protein Data Bank files (*.pdb, *.ent, *.pdb.gz, *.ent.gz, *.zip, *.txt) Imported File Types File FormatĤ54 Life Sciences output files (*.sff *.fas and *.qual)įASTA Format (*.fasta, *.fas, *.fap, *.nt, *.aa)įASTA Alignment with Gaps (*.fasta, *.fa, *.fas, *.fna, *.fap, *.nt, *.aa, *.frn, *.faa, *.ffn, *.mfa) Lasergene Molecular Biology and Lasergene Proteinīelow are the file formats supported for import and export by the applications within the Lasergene Molecular Biology and Lasergene Protein packages. ![]()
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